HL_7PO2_018

3D structure

PDB id

7PO2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UGAUGAA

Length

7 nucleotides

Bulged bases

7PO2|1|A|A|1283, 7PO2|1|A|U|1284

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO2_018 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2669

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7PO2|1|A|U|1281
7PO2|1|A|G|1282
7PO2|1|A|A|1283
7PO2|1|A|U|1284
7PO2|1|A|G|1285
7PO2|1|A|A|1286
7PO2|1|A|A|1287

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain B

28S ribosomal protein S2, mitochondrial

Chain D

28S ribosomal protein S5, mitochondrial

Chain E

28S ribosomal protein S6, mitochondrial

Chain S

28S ribosomal protein S23, mitochondrial