HL_7PO3_009

3D structure

PDB id

7PO3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UUGUAAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO3_009 not in the Motif Atlas

Geometric match to HL_4LFB_015

Geometric discrepancy: 0.2298

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.4

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7PO3|1|A|U|989
7PO3|1|A|U|990
7PO3|1|A|G|991
7PO3|1|A|U|992
7PO3|1|A|A|993
7PO3|1|A|A|994
7PO3|1|A|A|995
7PO3|1|A|A|996
7PO3|1|A|A|997
7PO3|1|A|A|998

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial