HL_7PO4_035
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- ACUUACAC(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PO4_035 not in the Motif Atlas
- Geometric match to HL_5E81_235
- Geometric discrepancy: 0.2441
- The information below is about HL_5E81_235
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 29
Unit IDs
7PO4|1|B|A|31
7PO4|1|B|C|32
7PO4|1|B|U|33
7PO4|1|B|U|34
7PO4|1|B|A|35
7PO4|1|B|C|36
7PO4|1|B|A|37
7PO4|1|B|C|38
7PO4|1|B|PSU|39
Current chains
- Chain B
- tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain e
- 39S ribosomal protein L46, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
Coloring options: