HL_7PTS_010

3D structure

PDB id

7PTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA origami 5-helix tile

Experimental method

ELECTRON MICROSCOPY

Resolution

5.71 Å

Loop

Sequence

GAACCGAUCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PTS_010 not in the Motif Atlas

Geometric match to HL_4PJO_001

Geometric discrepancy: 0.157

The information below is about HL_4PJO_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67407.4

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7PTS|1|A|G|299
7PTS|1|A|A|300
7PTS|1|A|A|301
7PTS|1|A|C|302
7PTS|1|A|C|303
7PTS|1|A|G|304
7PTS|1|A|A|305
7PTS|1|A|U|306
7PTS|1|A|C|307
7PTS|1|A|A|308
7PTS|1|A|C|309

Current chains

Chain A

5HT-B

Nearby chains