HL_7PWG_020
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCGAAAGAC
- Length
- 9 nucleotides
- Bulged bases
- 7PWG|1|1|A|629, 7PWG|1|1|G|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWG_020 not in the Motif Atlas
- Homologous match to HL_5TBW_021
- Geometric discrepancy: 0.1057
- The information below is about HL_5TBW_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7PWG|1|1|G|626
7PWG|1|1|C|627
7PWG|1|1|G|628
7PWG|1|1|A|629
7PWG|1|1|A|630
7PWG|1|1|A|631
7PWG|1|1|G|632
7PWG|1|1|A|633
7PWG|1|1|C|634
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain A
- Ribosomal protein L2
- Chain N
- Ribosomal protein L15
- Chain j
- Ribosomal protein L37
Coloring options: