HL_7PWG_050
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUACACCGGACCG
- Length
- 13 nucleotides
- Bulged bases
- 7PWG|1|1|A|2060, 7PWG|1|1|C|2067
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWG_050 not in the Motif Atlas
- Homologous match to HL_5TBW_055
- Geometric discrepancy: 0.1771
- The information below is about HL_5TBW_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
7PWG|1|1|C|2056
7PWG|1|1|U|2057
7PWG|1|1|A|2058
7PWG|1|1|C|2059
7PWG|1|1|A|2060
7PWG|1|1|C|2061
7PWG|1|1|C|2062
7PWG|1|1|G|2063
7PWG|1|1|G|2064
7PWG|1|1|A|2065
7PWG|1|1|C|2066
7PWG|1|1|C|2067
7PWG|1|1|G|2068
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain I
- Ribosomal protein L10
- Chain T
- Ribosomal protein L21
- Chain b
- 60S ribosomal protein L29
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