HL_7PWO_003
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_003 not in the Motif Atlas
- Homologous match to HL_5TBW_003
- Geometric discrepancy: 0.0904
- The information below is about HL_5TBW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
7PWO|1|1|C|87
7PWO|1|1|G|88
7PWO|1|1|G|89
7PWO|1|1|C|90
7PWO|1|1|G|91
7PWO|1|1|A|92
7PWO|1|1|G|93
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain L2
- 60S ribosomal protein L13
- Chain Q2
- Ribosomal protein L18
- Chain a2
- Ribosomal protein L27a
- Chain o2
- Ribosomal protein L44
- Chain w2
- E-site tRNA
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