HL_7PWO_013

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

C(OMG)UCUCGA(A2M)AC(A2M)CG

Length

14 nucleotides

Bulged bases

7PWO|1|1|C|395

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|385
7PWO|1|1|OMG|386
7PWO|1|1|U|387
7PWO|1|1|C|388
7PWO|1|1|U|389
7PWO|1|1|C|390
7PWO|1|1|G|391
7PWO|1|1|A|392
7PWO|1|1|A2M|393
7PWO|1|1|A|394
7PWO|1|1|C|395
7PWO|1|1|A2M|396
7PWO|1|1|C|397
7PWO|1|1|G|398

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain B2

Ribosomal protein L3

Chain C2

Ribosomal protein L4

Chain a2

Ribosomal protein L27a

Chain b2

60S ribosomal protein L29

Chain e2

Ribosomal protein L32