HL_7PWO_031
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCGGAGACUC
- Length
- 10 nucleotides
- Bulged bases
- 7PWO|1|1|C|1278, 7PWO|1|1|U|1279
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_031 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.2441
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7PWO|1|1|G|1271
7PWO|1|1|C|1272
7PWO|1|1|G|1273
7PWO|1|1|G|1274
7PWO|1|1|A|1275
7PWO|1|1|G|1276
7PWO|1|1|A|1277
7PWO|1|1|C|1278
7PWO|1|1|U|1279
7PWO|1|1|C|1280
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain R2
- Ribosomal protein L19
- Chain X2
- Ribosomal protein L23A
- Chain g2
- Ribosomal protein L34
Coloring options: