HL_7PWO_049
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7PWO|1|1|G|2041
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_049 not in the Motif Atlas
- Homologous match to HL_5TBW_054
- Geometric discrepancy: 0.1123
- The information below is about HL_5TBW_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7PWO|1|1|C|2039
7PWO|1|1|U|2040
7PWO|1|1|G|2041
7PWO|1|1|OMG|2042
7PWO|1|1|G|2043
7PWO|1|1|G|2044
7PWO|1|1|C|2045
7PWO|1|1|G|2046
7PWO|1|1|G|2047
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain E
- P-site tRNA
- Chain I2
- Ribosomal protein L10
- Chain b2
- 60S ribosomal protein L29
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