HL_7PWO_062

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CUGCCGCCUCUAAAG

Length

15 nucleotides

Bulged bases

7PWO|1|1|C|2531, 7PWO|1|1|U|2535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|2525
7PWO|1|1|U|2526
7PWO|1|1|G|2527
7PWO|1|1|C|2528
7PWO|1|1|C|2529
7PWO|1|1|G|2530
7PWO|1|1|C|2531
7PWO|1|1|C|2532
7PWO|1|1|U|2533
7PWO|1|1|C|2534
7PWO|1|1|U|2535
7PWO|1|1|A|2536
7PWO|1|1|A|2537
7PWO|1|1|A|2538
7PWO|1|1|G|2539

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain H2

Ribosomal protein L6

Chain O2

Ribosomal protein L13a

Chain m2

Ubiquitin/Ribosomal protein L40e