HL_7PWO_078

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CGGGUGAAACAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|2|C|651
7PWO|1|2|G|652
7PWO|1|2|G|653
7PWO|1|2|G|654
7PWO|1|2|U|655
7PWO|1|2|G|656
7PWO|1|2|A|657
7PWO|1|2|A|658
7PWO|1|2|A|659
7PWO|1|2|C|660
7PWO|1|2|A|661
7PWO|1|2|G|662

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain F1

Ribosomal protein S5

Chain O1

Ribosomal protein S14

Chain a1

40S ribosomal protein S26