HL_7PZY_030
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- CUGUUUUGACG
- Length
- 11 nucleotides
- Bulged bases
- 7PZY|1|1|G|1345, 7PZY|1|1|U|1346, 7PZY|1|1|U|1348, 7PZY|1|1|U|1349, 7PZY|1|1|G|1350, 7PZY|1|1|C|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PZY_030 not in the Motif Atlas
- Homologous match to HL_8C3A_029
- Geometric discrepancy: 0.1154
- The information below is about HL_8C3A_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13577.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PZY|1|1|C|1343
7PZY|1|1|U|1344
7PZY|1|1|G|1345
7PZY|1|1|U|1346
7PZY|1|1|U|1347
7PZY|1|1|U|1348
7PZY|1|1|U|1349
7PZY|1|1|G|1350
7PZY|1|1|A|1351
7PZY|1|1|C|1352
7PZY|1|1|G|1353
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AF
- Ribosomal 60S subunit protein L32
- Chain l
- Ribosomal 60S subunit protein L4B
- Chain n
- 60S ribosomal protein L6
- Chain o
- Ribosomal 60S subunit protein L7A
- Chain y
- Ribosomal 60S subunit protein L18A
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