HL_7Q08_010

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_010 not in the Motif Atlas

Homologous match to HL_8C3A_010

Geometric discrepancy: 0.056

The information below is about HL_8C3A_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7Q08|1|1|A|357
7Q08|1|1|G|358
7Q08|1|1|U|359
7Q08|1|1|G|360
7Q08|1|1|A|361
7Q08|1|1|U|362

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AK

Ribosomal protein L37

Chain AM

60S ribosomal protein L39

Chain l

Ribosomal 60S subunit protein L4B