HL_7Q08_043

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UUAACAG

Length

7 nucleotides

Bulged bases

7Q08|1|1|C|1862

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_043 not in the Motif Atlas

Homologous match to HL_8C3A_042

Geometric discrepancy: 0.0689

The information below is about HL_8C3A_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7Q08|1|1|U|1858
7Q08|1|1|U|1859
7Q08|1|1|A|1860
7Q08|1|1|A|1861
7Q08|1|1|C|1862
7Q08|1|1|A|1863
7Q08|1|1|G|1864

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain z

Ribosomal protein L19