HL_7Q08_052

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7Q08|1|1|A|2350, 7Q08|1|1|A|2351, 7Q08|1|1|C|2352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_052 not in the Motif Atlas

Homologous match to HL_8C3A_051

Geometric discrepancy: 0.0378

The information below is about HL_8C3A_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7Q08|1|1|G|2347
7Q08|1|1|G|2348
7Q08|1|1|G|2349
7Q08|1|1|A|2350
7Q08|1|1|A|2351
7Q08|1|1|C|2352
7Q08|1|1|G|2353
7Q08|1|1|G|2354
7Q08|1|1|G|2355
7Q08|1|1|C|2356

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AF

Ribosomal 60S subunit protein L32

Chain k

Ribosomal 60S subunit protein L3