HL_7Q08_056

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7Q08|1|1|G|2590

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_056 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0693

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7Q08|1|1|C|2588
7Q08|1|1|U|2589
7Q08|1|1|G|2590
7Q08|1|1|G|2591
7Q08|1|1|G|2592
7Q08|1|1|G|2593
7Q08|1|1|C|2594
7Q08|1|1|G|2595
7Q08|1|1|G|2596

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L29

Chain r

Ribosomal 60S subunit protein L10