HL_7Q08_070

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UUUUUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_070 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.379

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7Q08|1|1|U|3161
7Q08|1|1|U|3162
7Q08|1|1|U|3163
7Q08|1|1|U|3164
7Q08|1|1|U|3165
7Q08|1|1|A|3166

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain q

Ribosomal 60S subunit protein L9B

Chain u

Ribosomal 60S subunit protein L14B

Chain w

Ribosomal 60S subunit protein L16A