HL_7Q08_082

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UGUUUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_082 not in the Motif Atlas

Homologous match to HL_8C3A_195

Geometric discrepancy: 0.2023

The information below is about HL_8C3A_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78347.3

Basepair signature

cWW-F-F-tSW

Number of instances in this motif group

8

Unit IDs

7Q08|1|A|U|188
7Q08|1|A|G|189
7Q08|1|A|U|190
7Q08|1|A|U|191
7Q08|1|A|U|192
7Q08|1|A|G|193

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain J

40S ribosomal protein S8