3D structure

PDB id
7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Candida albicans 80S ribosome in complex with cycloheximide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.56 Å

Loop

Sequence
UUGUUCUUUUAUUGACG
Length
17 nucleotides
Bulged bases
7Q08|1|A|G|1038
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Q08|1|A|U|1036
7Q08|1|A|U|1037
7Q08|1|A|G|1038
7Q08|1|A|U|1039
7Q08|1|A|U|1040
7Q08|1|A|C|1041
7Q08|1|A|U|1042
7Q08|1|A|U|1043
7Q08|1|A|U|1044
7Q08|1|A|U|1045
7Q08|1|A|A|1046
7Q08|1|A|U|1047
7Q08|1|A|U|1048
7Q08|1|A|G|1049
7Q08|1|A|A|1050
7Q08|1|A|C|1051
7Q08|1|A|G|1052

Current chains

Chain A
18S ribosomal RNA

Nearby chains

Chain B
40S ribosomal protein S0
Chain C
40S ribosomal protein S1
Chain S
Ribosomal 40S subunit protein S17B
Chain c
40S ribosomal protein S27

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.174 s