HL_7Q0F_096

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

7Q0F|1|A|U|766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0F_096 not in the Motif Atlas

Geometric match to HL_1ZBH_001

Geometric discrepancy: 0.3449

The information below is about HL_1ZBH_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

7Q0F|1|A|C|762
7Q0F|1|A|C|763
7Q0F|1|A|U|764
7Q0F|1|A|U|765
7Q0F|1|A|U|766
7Q0F|1|A|G|767

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4

Chain K

Ribosomal 40S subunit protein S9B

Chain Z

40S ribosomal protein S24