HL_7Q0P_028

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

7Q0P|1|1|A|1241

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_028 not in the Motif Atlas

Geometric match to HL_5HR7_005

Geometric discrepancy: 0.2815

The information below is about HL_5HR7_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.5

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

7Q0P|1|1|C|1235
7Q0P|1|1|A|1236
7Q0P|1|1|U|1237
7Q0P|1|1|G|1238
7Q0P|1|1|G|1239
7Q0P|1|1|A|1240
7Q0P|1|1|A|1241
7Q0P|1|1|G|1242
7Q0P|1|1|U|1243
7Q0P|1|1|C|1244
7Q0P|1|1|G|1245

Current chains

Chain 1

25S ribosomal RNA

Nearby chains