HL_7Q0P_054

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GGUCAAAC

Length

8 nucleotides

Bulged bases

7Q0P|1|1|C|2517

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_054 not in the Motif Atlas

Homologous match to HL_8C3A_053

Geometric discrepancy: 0.1585

The information below is about HL_8C3A_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19906.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7Q0P|1|1|G|2514
7Q0P|1|1|G|2515
7Q0P|1|1|U|2516
7Q0P|1|1|C|2517
7Q0P|1|1|A|2518
7Q0P|1|1|A|2519
7Q0P|1|1|A|2520
7Q0P|1|1|C|2521

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain C

40S ribosomal protein S1

Chain p

60S ribosomal protein L8