Motif HL_19906.1 Version HL_19906.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 3-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2CSX_002 | 2CSX | 0.0000 | 2 | C | RNA (75-MER) | U | 31 | C | 32 | U | 33 | C | 34 | A | 35 | A | 38 | G | 39 | cWW | |
| 2 | HL_8C3A_053 | 8C3A | 0.9660 | 1 | 1 | LSU rRNA | G | 2514 | G | 2515 | U | 2516 | A | 2518 | A | 2519 | A | 2520 | C | 2521 | cWW | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUCAUAAG | 1 |
| GGUCAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCAUAA | 1 |
| GUCAAA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.97 | Avg 0.48 | Max 0.97
Coloring options: