HL_7Q0R_004

3D structure

PDB id

7Q0R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with blasticidin s

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

7Q0R|1|1|U|132, 7Q0R|1|1|U|134

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0R_004 not in the Motif Atlas

Homologous match to HL_8C3A_004

Geometric discrepancy: 0.0358

The information below is about HL_8C3A_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7Q0R|1|1|C|131
7Q0R|1|1|U|132
7Q0R|1|1|U|133
7Q0R|1|1|U|134
7Q0R|1|1|G|135

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AI

Ribosomal 60S subunit protein L35A

Chain v

Ribosomal protein L15