HL_7Q4K_005

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7Q4K|1|AA|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q4K_005 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2481

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7Q4K|1|AA|C|207
7Q4K|1|AA|U|208
7Q4K|1|AA|U|209
7Q4K|1|AA|C|210
7Q4K|1|AA|G|211
7Q4K|1|AA|G|212

Current chains

Chain AA

16S rRNA

Nearby chains