HL_7Q4K_083

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

7Q4K|1|BA|A|2211, 7Q4K|1|BA|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q4K_083 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.1202

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7Q4K|1|BA|G|2209
7Q4K|1|BA|U|2210
7Q4K|1|BA|A|2211
7Q4K|1|BA|A|2212
7Q4K|1|BA|U|2213
7Q4K|1|BA|C|2214
7Q4K|1|BA|C|2215

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BC

50S ribosomal protein L2