HL_7QCA_008

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAAAGAAAAGC

Length

11 nucleotides

Bulged bases

7QCA|1|L50|A|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|L50|G|258
7QCA|1|L50|A|259
7QCA|1|L50|A|260
7QCA|1|L50|A|261
7QCA|1|L50|G|262
7QCA|1|L50|A|263
7QCA|1|L50|A|264
7QCA|1|L50|A|265
7QCA|1|L50|A|266
7QCA|1|L50|G|267
7QCA|1|L50|C|268

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LC0

60S ribosomal protein L4

Chain LEE

60S ribosomal protein L32

Chain LY0

60S ribosomal protein L26