HL_7QCA_030
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GUUGAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 7QCA|1|L50|U|1236, 7QCA|1|L50|U|1237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QCA_030 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.1229
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7QCA|1|L50|G|1229
7QCA|1|L50|U|1230
7QCA|1|L50|U|1231
7QCA|1|L50|G|1232
7QCA|1|L50|A|1233
7QCA|1|L50|U|1234
7QCA|1|L50|A|1235
7QCA|1|L50|U|1236
7QCA|1|L50|U|1237
7QCA|1|L50|C|1238
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LGG
- Ribosomal protein L34
- Chain LLL
- 60S ribosomal protein L39
- Chain LR0
- 60S ribosomal protein L19
- Chain LX0
- 60S ribosomal protein L23a
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