HL_7QCA_052
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GCAUAAGGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QCA_052 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2374
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7QCA|1|L50|G|2063
7QCA|1|L50|C|2064
7QCA|1|L50|A|2065
7QCA|1|L50|U|2066
7QCA|1|L50|A|2067
7QCA|1|L50|A|2068
7QCA|1|L50|G|2069
7QCA|1|L50|G|2070
7QCA|1|L50|A|2071
7QCA|1|L50|C|2072
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LD0
- 60S ribosomal protein L5
- Chain LI0
- S60 ribosomal protein L10
- Chain LOO
- 60S ribosomal protein L44
- Chain LT0
- 60s ribosomal protein L21
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