HL_7QCA_058

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QCA_058 not in the Motif Atlas

Homologous match to HL_8C3A_064

Geometric discrepancy: 0.1208

The information below is about HL_8C3A_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7QCA|1|L50|U|2288
7QCA|1|L50|U|2289
7QCA|1|L50|G|2290
7QCA|1|L50|U|2291
7QCA|1|L50|U|2292
7QCA|1|L50|C|2293
7QCA|1|L50|A|2294

Current chains

Chain L50

RNA 23S

Nearby chains

Chain LB0

60S ribosomal protein L3