HL_7QCA_074

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CCUGAGAGACGG

Length

12 nucleotides

Bulged bases

7QCA|1|S60|C|305, 7QCA|1|S60|G|306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|C|296
7QCA|1|S60|C|297
7QCA|1|S60|U|298
7QCA|1|S60|G|299
7QCA|1|S60|A|300
7QCA|1|S60|G|301
7QCA|1|S60|A|302
7QCA|1|S60|G|303
7QCA|1|S60|A|304
7QCA|1|S60|C|305
7QCA|1|S60|G|306
7QCA|1|S60|G|307

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SE0

40S ribosomal protein S4

Chain SG0

40S ribosomal protein S6

Chain SI0

40S ribosomal protein S8

Chain SY0

40s ribosomal protein s24