HL_7QCA_077

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUGUAAAAACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|G|392
7QCA|1|S60|U|393
7QCA|1|S60|G|394
7QCA|1|S60|U|395
7QCA|1|S60|A|396
7QCA|1|S60|A|397
7QCA|1|S60|A|398
7QCA|1|S60|A|399
7QCA|1|S60|A|400
7QCA|1|S60|C|401
7QCA|1|S60|C|402

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SJ0

40S ribosomal protein S9

Chain SY0

40s ribosomal protein s24