HL_7QCA_080

3D structure

PDB id

7QCA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Spraguea lophii ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QCA|1|S60|A|602
7QCA|1|S60|G|603
7QCA|1|S60|G|604
7QCA|1|S60|U|605
7QCA|1|S60|G|606
7QCA|1|S60|A|607
7QCA|1|S60|A|608
7QCA|1|S60|A|609
7QCA|1|S60|U|610
7QCA|1|S60|U|611

Current chains

Chain S60

RNA SSU

Nearby chains

Chain SAA

40S ribosomal protein S26

Chain SF0

40S ribosomal protein S5

Chain SO0

40S ribosomal protein S14