HL_7QCA_092
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- AGCAGAAACAAAUAGAAGUAAAU
- Length
- 23 nucleotides
- Bulged bases
- 7QCA|1|S60|A|1118, 7QCA|1|S60|U|1123
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|S60|A|1111
7QCA|1|S60|G|1112
7QCA|1|S60|C|1113
7QCA|1|S60|A|1114
7QCA|1|S60|G|1115
7QCA|1|S60|A|1116
7QCA|1|S60|A|1117
7QCA|1|S60|A|1118
7QCA|1|S60|C|1119
7QCA|1|S60|A|1120
7QCA|1|S60|A|1121
7QCA|1|S60|A|1122
7QCA|1|S60|U|1123
7QCA|1|S60|A|1124
7QCA|1|S60|G|1125
7QCA|1|S60|A|1126
7QCA|1|S60|A|1127
7QCA|1|S60|G|1128
7QCA|1|S60|U|1129
7QCA|1|S60|A|1130
7QCA|1|S60|A|1131
7QCA|1|S60|A|1132
7QCA|1|S60|U|1133
Current chains
- Chain S60
- RNA SSU
Nearby chains
- Chain SD0
- 40S ribosomal protein S3
- Chain SF0
- 40S ribosomal protein S5
- Chain SQ0
- 40S ribosomal protein S16
- Chain SS0
- 40S ribosomal protein S18
- Chain ST0
- 40S Ribosomal protein S19
- Chain SZ0
- 40S ribosomal protein S25
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