3D structure

PDB id
7QCA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Spraguea lophii ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
GAGAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QCA|1|S60|G|1338
7QCA|1|S60|A|1339
7QCA|1|S60|G|1340
7QCA|1|S60|A|1341
7QCA|1|S60|A|1342
7QCA|1|S60|C|1343

Current chains

Chain S60
RNA SSU

Nearby chains

Chain L50
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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