HL_7QG8_012

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7QG8|1|0|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1255

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7QG8|1|0|G|462
7QG8|1|0|U|463
7QG8|1|0|U|464
7QG8|1|0|A|465
7QG8|1|0|A|466
7QG8|1|0|U|467
7QG8|1|0|A|468
7QG8|1|0|C|469
7QG8|1|0|C|470

Current chains

Chain 0

16S rRNA

Nearby chains