3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
GGGAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_032 not in the Motif Atlas
Homologous match to HL_6CZR_103
Geometric discrepancy: 0.0837
The information below is about HL_6CZR_103
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.6
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

7QG8|1|0|G|1515
7QG8|1|0|G|1516
7QG8|1|0|G|1517
7QG8|1|0|A|1518
7QG8|1|0|A|1519
7QG8|1|0|C|1520

Current chains

Chain 0
16S rRNA

Nearby chains

Chain N
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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