HL_7QG8_044

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7QG8|1|N|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_044 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.074

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7QG8|1|N|G|194
7QG8|1|N|A|195
7QG8|1|N|A|196
7QG8|1|N|A|197
7QG8|1|N|C|198
7QG8|1|N|A|199
7QG8|1|N|U|200
7QG8|1|N|C|201

Current chains

Chain N

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L15

Chain k

50S ribosomal protein L28