3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
GGACCAUC
Length
8 nucleotides
Bulged bases
7QG8|1|N|G|411
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_051 not in the Motif Atlas
Homologous match to HL_5J7L_146
Geometric discrepancy: 0.0793
The information below is about HL_5J7L_146
Detailed Annotation
Pseudoknot geometry
Broad Annotation
No text annotation
Motif group
HL_30680.3
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7QG8|1|N|G|410
7QG8|1|N|G|411
7QG8|1|N|A|412
7QG8|1|N|C|413
7QG8|1|N|C|414
7QG8|1|N|A|415
7QG8|1|N|U|416
7QG8|1|N|C|417

Current chains

Chain N
23S rRNA

Nearby chains

Chain Y
50S ribosomal protein L15

Coloring options:


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