HL_7QG8_060

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

7QG8|1|N|U|747, 7QG8|1|N|A|751, 7QG8|1|N|A|752

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_060 not in the Motif Atlas

Homologous match to HL_7A0S_022

Geometric discrepancy: 0.1098

The information below is about HL_7A0S_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

7QG8|1|N|U|744
7QG8|1|N|G|745
7QG8|1|N|U|746
7QG8|1|N|U|747
7QG8|1|N|G|748
7QG8|1|N|A|749
7QG8|1|N|A|750
7QG8|1|N|A|751
7QG8|1|N|A|752
7QG8|1|N|A|753

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32

Chain p

50S ribosomal protein L34

Chain s

VemP nascent chain