3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
GAAACAAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_065 not in the Motif Atlas
Homologous match to HL_7A0S_027
Geometric discrepancy: 0.1565
The information below is about HL_7A0S_027
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_47171.1
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
10

Unit IDs

7QG8|1|N|G|978
7QG8|1|N|A|979
7QG8|1|N|A|980
7QG8|1|N|A|981
7QG8|1|N|C|982
7QG8|1|N|A|983
7QG8|1|N|A|984
7QG8|1|N|C|985

Current chains

Chain N
23S rRNA

Nearby chains

Chain d
50S ribosomal protein L20
Chain e
50S ribosomal protein L21
Chain m
50S ribosomal protein L30

Coloring options:


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