HL_7QG8_078

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7QG8|1|N|A|1614, 7QG8|1|N|A|1616, 7QG8|1|N|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_078 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.0699

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

7QG8|1|N|C|1612
7QG8|1|N|G|1613
7QG8|1|N|A|1614
7QG8|1|N|C|1615
7QG8|1|N|A|1616
7QG8|1|N|C|1617
7QG8|1|N|A|1618
7QG8|1|N|G|1619

Current chains

Chain N

23S rRNA

Nearby chains

Chain f

50S ribosomal protein L22

Chain p

50S ribosomal protein L34

Chain s

VemP nascent chain