HL_7QGH_084

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7QGH|1|N|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_084 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.0769

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

7QGH|1|N|G|1949
7QGH|1|N|G|1950
7QGH|1|N|U|1951
7QGH|1|N|A|1952
7QGH|1|N|A|1953
7QGH|1|N|G|1954
7QGH|1|N|U|1955
7QGH|1|N|U|1956
7QGH|1|N|C|1957

Current chains

Chain N

23S rRNA

Nearby chains

Chain 0

Small subunit ribosomal RNA; SSU rRNA

Chain X

50S ribosomal protein L14