HL_7QGH_090

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_090 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.1518

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7QGH|1|N|G|2303
7QGH|1|N|G|2304
7QGH|1|N|U|2305
7QGH|1|N|C|2306
7QGH|1|N|G|2307
7QGH|1|N|G|2308
7QGH|1|N|A|2309
7QGH|1|N|C|2310
7QGH|1|N|A|2311
7QGH|1|N|U|2312
7QGH|1|N|C|2313

Current chains

Chain N

23S rRNA

Nearby chains

Chain O

5S ribosomal RNA; 5S rRNA

Chain S

50S ribosomal protein L5