HL_7QGH_107
3D structure
- PDB id
- 7QGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli disome - collided 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.48 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7QGH|1|u|U|16, 7QGH|1|u|C|17, 7QGH|1|u|G|18, 7QGH|1|u|G|19, 7QGH|1|u|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QGH_107 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.2064
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QGH|1|u|C|13
7QGH|1|u|A|14
7QGH|1|u|G|15
7QGH|1|u|U|16
7QGH|1|u|C|17
7QGH|1|u|G|18
7QGH|1|u|G|19
7QGH|1|u|U|20
7QGH|1|u|A|21
7QGH|1|u|G|22
Current chains
- Chain u
- A-site tRNA
Nearby chains
- Chain M
- Transfer RNA; tRNA
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: