HL_7QGN_061

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

7QGN|1|N|A|781, 7QGN|1|N|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGN_061 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1405

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

7QGN|1|N|U|779
7QGN|1|N|G|780
7QGN|1|N|A|781
7QGN|1|N|A|782
7QGN|1|N|A|783
7QGN|1|N|G|784
7QGN|1|N|G|785

Current chains

Chain N

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L2