HL_7QGN_080

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7QGN|1|N|U|1693

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGN_080 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.0815

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

7QGN|1|N|C|1691
7QGN|1|N|U|1692
7QGN|1|N|U|1693
7QGN|1|N|C|1694
7QGN|1|N|G|1695
7QGN|1|N|G|1696

Current chains

Chain N

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L2