HL_7QGR_049

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGR_049 not in the Motif Atlas

Geometric match to HL_4WF9_015

Geometric discrepancy: 0.0603

The information below is about HL_4WF9_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7QGR|1|N|C|462
7QGR|1|N|G|463
7QGR|1|N|U|464
7QGR|1|N|G|465
7QGR|1|N|A|466
7QGR|1|N|G|467

Current chains

Chain N

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L4

Chain p

50S ribosomal protein L34