HL_7QGR_056

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGR_056 not in the Motif Atlas

Geometric match to HL_5J7L_154

Geometric discrepancy: 0.0956

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7QGR|1|N|G|712
7QGR|1|N|G|713
7QGR|1|N|U|714
7QGR|1|N|A|715
7QGR|1|N|A|716
7QGR|1|N|C|717
7QGR|1|N|A|718
7QGR|1|N|C|719

Current chains

Chain N

23S rRNA

Nearby chains

Chain F

30S ribosomal protein S15

Chain P

50S ribosomal protein L2